PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G136800.1.p
Common NamePRUPE_ppa015566mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 261aa    MW: 28197.2 Da    PI: 5.6038
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G136800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000531521891254
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         R +++ ++++ L++l+ +      +K + a++L +A+ YI+ L
  Prupe.8G136800.1.p 152 RKEKLGERIAALQQLVSPF-----GKTDTASVLHEAMGYIRFL 189
                         77788899********998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.02140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.21E-5151194No hitNo description
Gene3DG3DSA:4.10.280.103.2E-7151196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-10151201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MAENDGLEGD HLAVTEGTSF SQLLFAADEG CGLGMDDETF NYTHSSAYST QIKPPKMLCF  60
GNYDHSHGDG LEIGFSETAK KSGVTCSDSS SVYSTSNTII NALPESNNKR RNGLGQESVQ  120
CASTISTTTT ASQRTSKKTK SENPTSTGNA KRKEKLGERI AALQQLVSPF GKTDTASVLH  180
EAMGYIRFLH DQVQVLCSPY LQRLPSLPDG EMEEARKDLR SRGLCLAPVE YTMHVADNNG  240
ADFWSPAMAN NNNNVSSTKY *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201519.10.0hypothetical protein PRUPE_ppa015566mg
TrEMBLM5W0G20.0M5W0G2_PRUPE; Uncharacterized protein
STRINGVIT_03s0091g00210.t012e-85(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103212129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.11e-43bHLH family protein